PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51822.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ARR-B

Protein Properties

Length: 566aa MW: 62567.6 Da PI: 6.3154

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51822.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.2	3.7e-28	315	369	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++Fv+aveqL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ PON51822.1 315 KMKVDWTPELHKKFVHAVEQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 369 5689***************.******************************96 PP
2	Myb_DNA-binding	43.8	6e-14	318	367	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av+qlG + +++I + m +g+t+ ++ s++qky+ PON51822.1 318 VDWTPELHKKFVHAVEQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 367 57***********************************************7 PP
3	Response_reg	34	1.5e-12	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+ d++ + + +r+ le +y +v ++ + +eal+ + ++ ++l ++ ++ +G ++k +++++ +lpii+ + +++ +++ +Ga PON51822.1 20 VLVLDEDTTSAAEIRSKLEAMDY-VVSTFCNETEALTAFSNEPesFHLAIVEVNSN--NGCGTFKFLETAK-ELPIIMTSNIHCLSTMMKCIARGAV 112 7999*****************.***********88887799999998766..6777888887777.8999999999*********** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 +fl Kp ++++l++ PON51822.1 113 EFLPKPLSEDKLRN 126 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MVCTANDLQE WKDFPKGLRV LVLDEDTTSA AEIRSKLEAM DYVVSTFCNE TEALTAFSNE 60 PESFHLAIVE VNSNNGCGTF KFLETAKELP IIMTSNIHCL STMMKCIARG AVEFLPKPLS 120 EDKLRNIWQH VVHKAFNAGG GLLPEPLKPV KESIASMLHL KLENVEPDSK ISVEIDNLSE 180 IKENDQEQSA GSDKYPAPST PQLKQGARLL DDGDCQDQNN CSAEKENGEQ DGDCKSVETT 240 YGDSAADDTI LIGETKTPVK TMIKKDSIDA SKSESHMSSH LHNGNSLINV IGGADNPGKA 300 SGLTNTSLSK SNRKKMKVDW TPELHKKFVH AVEQLGVDQA IPSRILELMK VEGLTRHNVA 360 SHLQKYRMHK RHILPKEEDR RWPRPRDPVQ KNYYPQHPIM AFPTYHSNHA LPVAPVYSMW 420 GQPGGHPASV QMWGPPAYPP WQATESWQWK PYSGMHADAW GCPVMPPPHG PYASYPQNAS 480 GFHNVGVVDN VCSTPQNSFD FHPAEEVIDK VVKEAINKPW LPLPLGLKPP STDSVLSELS 540 RQGISSIPPH INGSDSFCHG AGSHHD

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MVCTANDLQE WKDFPKGLRV LVLDEDTTSA AEIRSKLEAM DYVVSTFCNE TEALTAFSNE  60
PESFHLAIVE VNSNNGCGTF KFLETAKELP IIMTSNIHCL STMMKCIARG AVEFLPKPLS  120
EDKLRNIWQH VVHKAFNAGG GLLPEPLKPV KESIASMLHL KLENVEPDSK ISVEIDNLSE  180
IKENDQEQSA GSDKYPAPST PQLKQGARLL DDGDCQDQNN CSAEKENGEQ DGDCKSVETT  240
YGDSAADDTI LIGETKTPVK TMIKKDSIDA SKSESHMSSH LHNGNSLINV IGGADNPGKA  300
SGLTNTSLSK SNRKKMKVDW TPELHKKFVH AVEQLGVDQA IPSRILELMK VEGLTRHNVA  360
SHLQKYRMHK RHILPKEEDR RWPRPRDPVQ KNYYPQHPIM AFPTYHSNHA LPVAPVYSMW  420
GQPGGHPASV QMWGPPAYPP WQATESWQWK PYSGMHADAW GCPVMPPPHG PYASYPQNAS  480
GFHNVGVVDN VCSTPQNSFD FHPAEEVIDK VVKEAINKPW LPLPLGLKPP STDSVLSELS  540
RQGISSIPPH INGSDSFCHG AGSHHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-140	ARR-B family protein