PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON51896.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

DBB

Protein Properties

Length: 524aa MW: 56755.9 Da PI: 5.853

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON51896.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.6	1.9e-06	12	43	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++e+ + l+C+ ++ lC C ++ H+ PON51896.1 12 VPCDFCSEQVAVLYCRADSAKLCLFCDQHVHS 43 67**************************9995 PP
2	zf-B_box	20.4	1.1e-06	54	97	3	40
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 ++C+++++++++ C + + lC+dC H + H++ PON51896.1 54 SQICDNCGSEPVSVRCSTENLVLCQDCDWDAHGScsvsasHDRN 97 579************************99999447777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MVSPRSRTGN SVPCDFCSEQ VAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC 60 GSEPVSVRCS TENLVLCQDC DWDAHGSCSV SASHDRNSIE GFSGCPSALE LASIWGFTLG 120 DNKKPGRPDP PIQNWSGAHE LGMPVESSWA FKYQSDGVSF QDLIVPSENG VAYPNTSCGE 180 VVAKKMSGGG ASCCGKKKQV MYRQLVELLK RDLVADEGGD FGDGGGGGGG VESLLPETPS 240 RSGWQGDVEA LGLGDGGGDD DDGVSGVLGD PAFTAVAAAQ PSLQIRAPFT SLLMMPMRGD 300 LKESDGIVDG DVGLWDTNPS GQTTQIWDFH LGRLRVHEEP EAAYGVNDAG FVIKNFGELM 360 KEGSLTNTKM FRDIYQLNCP VAHEDITINN NSNNPTASQG PATSESNNLP IGRPSVGSAF 420 SKTEESASKE MHFREQPFLV RSDKMKTAAT SKAEMELLSQ NRGNAMQRYK EKKKTRRLSK 480 LPMVKSKTCC EGYRSSITFC KYFLCTFPSR QKCIIYVGSF FMLI

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MVSPRSRTGN SVPCDFCSEQ VAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC  60
GSEPVSVRCS TENLVLCQDC DWDAHGSCSV SASHDRNSIE GFSGCPSALE LASIWGFTLG  120
DNKKPGRPDP PIQNWSGAHE LGMPVESSWA FKYQSDGVSF QDLIVPSENG VAYPNTSCGE  180
VVAKKMSGGG ASCCGKKKQV MYRQLVELLK RDLVADEGGD FGDGGGGGGG VESLLPETPS  240
RSGWQGDVEA LGLGDGGGDD DDGVSGVLGD PAFTAVAAAQ PSLQIRAPFT SLLMMPMRGD  300
LKESDGIVDG DVGLWDTNPS GQTTQIWDFH LGRLRVHEEP EAAYGVNDAG FVIKNFGELM  360
KEGSLTNTKM FRDIYQLNCP VAHEDITINN NSNNPTASQG PATSESNNLP IGRPSVGSAF  420
SKTEESASKE MHFREQPFLV RSDKMKTAAT SKAEMELLSQ NRGNAMQRYK EKKKTRRLSK  480
LPMVKSKTCC EGYRSSITFC KYFLCTFPSR QKCIIYVGSF FMLI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	471	478	EKKKTRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.1	7e-87	CO-like family protein