PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52068.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 358aa MW: 41082.2 Da PI: 8.1909

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.6	1.2e-49	21	148	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel. 99 pGfrFhPtdeelv +yLk+k+ +k++++ e ik++diyk++PwdLpk + ++kewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+++s k+ PON52068.1 21 LPGFRFHPTDEELVGFYLKRKIGKKPISI-ELIKQIDIYKYDPWDLPKVSNVGDKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKE-Py 117 59*************************.89***********888889***********************************9643.23 PP NAM 100 ..vglkktLvfykgrapkgektdWvmheyrl 128 +glkk+Lv+y+g+a kg+ktdW+mhe+rl PON52068.1 118 dcIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 148 56*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MEMANNKVKE SDKELEDEGA LPGFRFHPTD EELVGFYLKR KIGKKPISIE LIKQIDIYKY 60 DPWDLPKVSN VGDKEWYFFC IRGRKYRNSI RPNRVTGSGF WKATGIDKPI YSVKEPYDCI 120 GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP NGKTTTPANF QNAKENINDI AQEAEVWTLC 180 RIFKRIPSYK KYVPADNKWK ETTTKKSTSS CPLDYNDSSS KTCSLETDYP EPYVSLELDT 240 SSANQYQRQA GLVLGGDEMT PTSATTRPSW FVGQYGNNNI VPLAAHPHPH HYYPHPHPHP 300 HHVLQAPFSA SYNPTSFNRN NLNSADDIFM NGSWDELRSV VQLAVDRHPS ELYDINIW

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MEMANNKVKE SDKELEDEGA LPGFRFHPTD EELVGFYLKR KIGKKPISIE LIKQIDIYKY  60
DPWDLPKVSN VGDKEWYFFC IRGRKYRNSI RPNRVTGSGF WKATGIDKPI YSVKEPYDCI  120
GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP NGKTTTPANF QNAKENINDI AQEAEVWTLC  180
RIFKRIPSYK KYVPADNKWK ETTTKKSTSS CPLDYNDSSS KTCSLETDYP EPYVSLELDT  240
SSANQYQRQA GLVLGGDEMT PTSATTRPSW FVGQYGNNNI VPLAAHPHPH HYYPHPHPHP  300
HHVLQAPFSA SYNPTSFNRN NLNSADDIFM NGSWDELRSV VQLAVDRHPS ELYDINIW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	4e-92	NAC family protein