PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52200.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 604aa MW: 67422.9 Da PI: 7.9623

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.6	6.8e-25	135	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg+ WrKYGqK+v gs++pr YY+C + +C+vkkkv+rs+ +++++ei +g Hnh+ PON52200.1 135 EDGFYWRKYGQKQVVGSKYPRIYYKCMHLNCKVKKKVKRSD-EGHITEILHSGVHNHH 191 7*************************************9.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MEDGCQSPPN SLMEACFGSA QNSGTSVTFV DLDKSDVYVD DDFFQDINAS SFSLKPVTNP 60 GSSFFLGAAA SKMTSSGLSQ QSFPTMEELN QYENTPRTLE PIGVENRNKN MLQLQADREG 120 DPDCSAGGGG SITSEDGFYW RKYGQKQVVG SKYPRIYYKC MHLNCKVKKK VKRSDEGHIT 180 EILHSGVHNH HKPPNPRSAI GSSDSYSPAT EKRCPPKNTL DLPQTNFKAS STENSQLDLT 240 SSQKAEVQIS LNRSISSDLL NSVAPIQPSY SNIVCDNQAA WPKIKELLKL ACQRYRLPLA 300 QTWVPCGHRL FDQDSNSNND LWAYSISDQA FYARTILMQV FHDVCSEHYL LKGQGIVGEA 360 FVTNKPRFSP DVTSYCKAEY PLTYHTKRLK FRSAVAIPAY WDGSIPPGDR TAPDFVVEFF 420 LPLDCTDVEE QKNMVTSLKS LIALDLCIAA ELELEQESGS KQDSDNGLIP RSVTNLTEGK 480 FSSLAETDTS EEPRHKRCSM KRTDLLAGGL KDAEKKSTTR GKNSRSSRGK RDPTWKYCFP 540 IEGNIHGVKC SFCKLVIQGG GITRFKLHLV SNDPSKNVKK CPNVPYEVKD EVENWIRRKD 600 NKRK

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MEDGCQSPPN SLMEACFGSA QNSGTSVTFV DLDKSDVYVD DDFFQDINAS SFSLKPVTNP  60
GSSFFLGAAA SKMTSSGLSQ QSFPTMEELN QYENTPRTLE PIGVENRNKN MLQLQADREG  120
DPDCSAGGGG SITSEDGFYW RKYGQKQVVG SKYPRIYYKC MHLNCKVKKK VKRSDEGHIT  180
EILHSGVHNH HKPPNPRSAI GSSDSYSPAT EKRCPPKNTL DLPQTNFKAS STENSQLDLT  240
SSQKAEVQIS LNRSISSDLL NSVAPIQPSY SNIVCDNQAA WPKIKELLKL ACQRYRLPLA  300
QTWVPCGHRL FDQDSNSNND LWAYSISDQA FYARTILMQV FHDVCSEHYL LKGQGIVGEA  360
FVTNKPRFSP DVTSYCKAEY PLTYHTKRLK FRSAVAIPAY WDGSIPPGDR TAPDFVVEFF  420
LPLDCTDVEE QKNMVTSLKS LIALDLCIAA ELELEQESGS KQDSDNGLIP RSVTNLTEGK  480
FSSLAETDTS EEPRHKRCSM KRTDLLAGGL KDAEKKSTTR GKNSRSSRGK RDPTWKYCFP  540
IEGNIHGVKC SFCKLVIQGG GITRFKLHLV SNDPSKNVKK CPNVPYEVKD EVENWIRRKD  600
NKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-41	Nin-like family protein