PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52371.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

ARR-B

Protein Properties

Length: 701aa MW: 76812 Da PI: 6.5174

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.5	4.6e-26	208	261	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +pr++W+peLH++Fv av++L ekA+Pk+il+lm+ +gLt+e+v+SHLQkYRl PON52371.1 208 RPRVVWSPELHRKFVAAVHNL-TLEKAVPKKILDLMNEEGLTRENVASHLQKYRL 261 59*****************.9*****************************8 PP
2	Myb_DNA-binding	37.5	5.6e-12	210	260	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v av+ l + +k+I m+ +g+t++++ s++qky+ PON52371.1 210 RVVWSPELHRKFVAAVHNLTLEkaVPKKILDLMNeEGLTRENVASHLQKYR 260 678***************99**************************7 PP
3	Response_reg	82	1.9e-27	23	131	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ +++l+++l+k +y +v+++ ++ +al++l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + Ga PON52371.1 23 VLAVDDDPICLKVLETLLRKCQY-QVTTTNQAIKALKILRESRnkFDLVISDVNMPDMDGFKLLEFVGL-EMDLPVIMLSAHSDTKLVMKGITHGAV 117 799******************.***********999999***************98855.458******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +eel + PON52371.1 118 DYLLKPVRIEELKN 131 *********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MTVEDQRGGE YGAFDRFPVG MRVLAVDDDP ICLKVLETLL RKCQYQVTTT NQAIKALKIL 60 RESRNKFDLV ISDVNMPDMD GFKLLEFVGL EMDLPVIMLS AHSDTKLVMK GITHGAVDYL 120 LKPVRIEELK NIWQHVVRRK KLDPKNQSNS QEKACHEAGE VGKGLASTVY LDSNAKLNKK 180 RKDQGDDEEE GGEDSETENE DPSATQKRPR VVWSPELHRK FVAAVHNLTL EKAVPKKILD 240 LMNEEGLTRE NVASHLQKYR LYLKRISTEA TQQASMIAAL GGKDSAYMRM GTLDGFGDLQ 300 ALTGSGRLSN TPLSTYTHGG MLSRLNSPAG LTLRGISSTG LIQPGNPQNF KSFNTLGKFQ 360 RSVSANQSTS LFQGIPASLE LNKFQQTKST TYIGEFSALN NPTGFAVPAS FPDMRVTVGN 420 SGTASNSSST SLILQPNPQQ THCRGALGSQ SSVRVTPLHS ESFDRGISGS SNFLDHNRCN 480 ESWQVAVQSS KFPSTALPMS EPSNRGQMHS NDLGISSTTT QIGNKPNDIS SASAFLAPLA 540 DSRNVQGQDG LIGHFVQTTN YRVSQGWDGQ TKNYNHNLNQ NFSASSSLVS SNSTMEYINQ 600 GLGQQGTVCS ENFNRSILDQ LNGCTSSVYG TSEIEKSVIG TKIGSSEDYF LSQAKAQDAF 660 IQKNYESLDD IMTAMMKQEQ NETILMDGEF GFDTYPLGSC I

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MTVEDQRGGE YGAFDRFPVG MRVLAVDDDP ICLKVLETLL RKCQYQVTTT NQAIKALKIL  60
RESRNKFDLV ISDVNMPDMD GFKLLEFVGL EMDLPVIMLS AHSDTKLVMK GITHGAVDYL  120
LKPVRIEELK NIWQHVVRRK KLDPKNQSNS QEKACHEAGE VGKGLASTVY LDSNAKLNKK  180
RKDQGDDEEE GGEDSETENE DPSATQKRPR VVWSPELHRK FVAAVHNLTL EKAVPKKILD  240
LMNEEGLTRE NVASHLQKYR LYLKRISTEA TQQASMIAAL GGKDSAYMRM GTLDGFGDLQ  300
ALTGSGRLSN TPLSTYTHGG MLSRLNSPAG LTLRGISSTG LIQPGNPQNF KSFNTLGKFQ  360
RSVSANQSTS LFQGIPASLE LNKFQQTKST TYIGEFSALN NPTGFAVPAS FPDMRVTVGN  420
SGTASNSSST SLILQPNPQQ THCRGALGSQ SSVRVTPLHS ESFDRGISGS SNFLDHNRCN  480
ESWQVAVQSS KFPSTALPMS EPSNRGQMHS NDLGISSTTT QIGNKPNDIS SASAFLAPLA  540
DSRNVQGQDG LIGHFVQTTN YRVSQGWDGQ TKNYNHNLNQ NFSASSSLVS SNSTMEYINQ  600
GLGQQGTVCS ENFNRSILDQ LNGCTSSVYG TSEIEKSVIG TKIGSSEDYF LSQAKAQDAF  660
IQKNYESLDD IMTAMMKQEQ NETILMDGEF GFDTYPLGSC I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-120	ARR-B family protein