PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON52953.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 601aa MW: 66032.2 Da PI: 4.5377

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON52953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	92.9	3.6e-29	146	264	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT...................XTTSE CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks...................kekiw 79 Fl+k++++++d++l+ +isw ++g sfvv+d+ efa+ +Lp+ Fkh+nf+SFvRQLn+Y v+ + +++ w PON52953.1 146 FLSKTFDLVDDPTLDPIISWGSTGGSFVVWDPVEFARLILPRNFKHNNFSSFVRQLNTYVGILVTPSVVAA-VicmlmmdisagaghgfrkiDTDKW 241 9********************************************************888777777553.2589999999888877765449* PP EEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 80 eFkhksFkkgkkellekikrkks 102 eF+++ F++gkk+ll++i+r+k PON52953.1 242 EFANEAFQRGKKHLLKSIQRRKA 264 *********************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MNPKDEGFLP RSSEELESET FGFSSIGSEM AEPLGAQAQP FLSEPFFMDS AASFSMDSIR 60 FSGSHSSSSF GFSPMGIEAF PSMNPSESSS SPVFEFKAGN PVGEIAHTVP STTGGEAGAP 120 VTGSGTEFVA VPQPLERLLG SPVPPFLSKT FDLVDDPTLD PIISWGSTGG SFVVWDPVEF 180 ARLILPRNFK HNNFSSFVRQ LNTYVGILVT PSVVAAVICM LMMDISAGAG HGFRKIDTDK 240 WEFANEAFQR GKKHLLKSIQ RRKAPQSQQM ASYIGPSTEA GKSGLEGEVE RLRKEKSTLM 300 QEVVKLQQQQ RGTVHLMEVV NKRIQSAEQR QKQMVSFFAK MLQNLSFIAR LKQKEQQKEI 360 GSSRVRRKRV TQQQHEIGEP DSSMEAQLVK YSPGWRNLGI PSAGPDVNPF PTEQGMAGNL 420 VIDEENMPFQ SQDFTSDKLT LSDEITAMQE FYRTADQAGG GASSMQTEDP LFKGKGILSP 480 QQELNPEYYV SFPEDLIKEK SFPELSSTGM ESIIKQDDMW SMGLDASVGM SSGGNELLDT 540 PVTYEMPELG MISGLLDIWD LGSLQVGGSE VHKWSADESP FNEPESQASQ PKDDIPKNMD 600 Q

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MNPKDEGFLP RSSEELESET FGFSSIGSEM AEPLGAQAQP FLSEPFFMDS AASFSMDSIR  60
FSGSHSSSSF GFSPMGIEAF PSMNPSESSS SPVFEFKAGN PVGEIAHTVP STTGGEAGAP  120
VTGSGTEFVA VPQPLERLLG SPVPPFLSKT FDLVDDPTLD PIISWGSTGG SFVVWDPVEF  180
ARLILPRNFK HNNFSSFVRQ LNTYVGILVT PSVVAAVICM LMMDISAGAG HGFRKIDTDK  240
WEFANEAFQR GKKHLLKSIQ RRKAPQSQQM ASYIGPSTEA GKSGLEGEVE RLRKEKSTLM  300
QEVVKLQQQQ RGTVHLMEVV NKRIQSAEQR QKQMVSFFAK MLQNLSFIAR LKQKEQQKEI  360
GSSRVRRKRV TQQQHEIGEP DSSMEAQLVK YSPGWRNLGI PSAGPDVNPF PTEQGMAGNL  420
VIDEENMPFQ SQDFTSDKLT LSDEITAMQE FYRTADQAGG GASSMQTEDP LFKGKGILSP  480
QQELNPEYYV SFPEDLIKEK SFPELSSTGM ESIIKQDDMW SMGLDASVGM SSGGNELLDT  540
PVTYEMPELG MISGLLDIWD LGSLQVGGSE VHKWSADESP FNEPESQASQ PKDDIPKNMD  600
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-95	HSF family protein