PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53050.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 415aa    MW: 47749.2 Da    PI: 9.6317
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.52.1e-17694296
                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
                f +l+ s++ + ++l++p +f++++  +   s+  t++ ++g +W+v l  +k ++++++ +GW++Fv+  g+++g f++F+++g+s+f  +v +
  PON53050.1  6 FHKLIYSSTIQAKQLRIPDSFVKKFRDE--LSTVATITVPDGHVWRVGL--KKADNKIWFHDGWQDFVERYGIRVGYFLIFRYEGNSTF--NVFI 94
                56788899999999********999755..888999999**********..**********************************9999..5444 PP
2B3604e-19301391498
                 E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 vl ps+  + ++++lp  fae++ +g++     ++l++++gr+W v++ yr+++    l++GW eF  +n+L egD++vF+l + +e  l+v+vfr
  PON53050.1 301 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQTSDGRQWPVRCLYRGGR--AKLSQGWYEFSLENNLGEGDVCVFELLKMKEVVLKVTVFR 391
                 78899******************877743...5***************665555..66***********************998888889999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MPRSYFHKLI YSSTIQAKQL RIPDSFVKKF RDELSTVATI TVPDGHVWRV GLKKADNKIW  60
FHDGWQDFVE RYGIRVGYFL IFRYEGNSTF NVFIFNLSTS EINYQHPLNS SQAIYSNRYQ  120
FFEEMEDDSD EILGFSPARM TTGPLKAKLF GERAEQMTSG KVFNPPSLQN LFNGSKLNCI  180
NWGNEGNLHP AKGAGNFQAE NQLTRDIGVQ FNVMEPKKSA DEVKLQNSEE DIRKTKKAGR  240
KKRKIESNGQ ESSIRPDETD MRFRFYESAS ARKRTVTAEE RERAINTAKT FEPTNPFCRV  300
VLRPSYLYRG CIMYLPSCFA EKNLNGVSGF IKLQTSDGRQ WPVRCLYRGG RAKLSQGWYE  360
FSLENNLGEG DVCVFELLKM KEVVLKVTVF RVLEDAGMIN QPSQHTVSQS KLIRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-141B3 family protein