PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53146.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 255aa    MW: 29169 Da    PI: 9.8734
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00012727323
                ETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                C++C+k++s+   L  H+r+H
  PON53146.1  7 CKICNKRYSNGKALGGHMRSH 27
                ********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEKHRICKIC NKRYSNGKAL GGHMRSHLAK LPLPHKPQTN STSTPPQQPP LTTSQYSSSS  60
SHVHNQMESD TESDYSQYNH ANFMTTRRRS KRPRRTSVLL SVSKPPLFKA ADEDDDDDDD  120
DEEEETLSAE DAAMYLIKLS KDKWEKEEGG EAESLERTRS SSRFKCKTCK KVFGSYQALG  180
GHKANHKKVD QXLMKKNGLK RVPKLCRLMV RQEHLSAHFV SRSLLLVKHL VDTRRCTTRI  240
IYLLLLLGNV ETILL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.17e-11C2H2 family protein