PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53169.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 222aa    MW: 24874 Da    PI: 10.1546
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.94.8e-1030705698
                TTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 56 sgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                + +  +t+GW++Fv+  +L+ gDf++Fk +g+s+f  +vk++ 
  PON53169.1 30 KLKLCFTRGWEGFVSKYKLERGDFLLFKSIGNSCF--RVKIYA 70
                445889*****************************..777765 PP
2B346.18.5e-151402211598
                 -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-..SS.SEE..EEEEE- CS
          B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld..gr.sefelvvkvfr 98 
                  +v+p+  +  +g++  ++k+++l+  + +sW+v +  +k++gr v+t++W eF +an+LkegD++vF l+  ++ +++e+ v++++
  PON53169.1 140 SVVIPRILL--IGIN--TGKEIKLRYGNKKSWTVGI-TSKTDGRGVITTNWVEFRRANNLKEGDMCVFDLVvgKDnTCKEMIVSIID 221
                 467888877..5555..5679***************.588888899***********************765445577788887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MARPTISFPK LEEDGPEFFK VFMPTLSSQK LKLCFTRGWE GFVSKYKLER GDFLLFKSIG  60
NSCFRVKIYA KNGCKKELAA VMNNIINHDP IPNGKMKEGS SSGLGEDKSN IKIGGTDQFV  120
PPKNLRFVVT LYNTRASLYS VVIPRILLIG INTGKEIKLR YGNKKSWTVG ITSKTDGRGV  180
ITTNWVEFRR ANNLKEGDMC VFDLVVGKDN TCKEMIVSII DG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.12e-12B3 family protein