PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON53302.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

SRS

Protein Properties

Length: 230aa MW: 24943.9 Da PI: 10.2112

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON53302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	178	4.3e-55	45	207	3	153
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssa..eskke 99 gt +C dCGn+ak+dC ++RCRtCCk+r+f C+thv+stWvp ++rr r ++ + + +s +++askr+r +++++ ++ s+t+ s++ +++k PON53302.1 45 GGTRACTDCGNRAKRDCGFSRCRTCCKARAFPCSTHVRSTWVPPSRRRLRLPATLDGAGGNGSSGSSSASKRPRLHECQTDASHSHTSNSNNaiTTPKG 143 57899*******************************************99988888999999999***9977777777776665541134444 PP DUF702 100 letss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++++s lP++v+++a+frc rv+++ dg+ e+aYq +v i+GhvfkG+LydqG+ PON53302.1 144 FHATSihqdaifkqsLPNKVRAPAIFRCHRVTAIGDGKVEIAYQVTVRISGHVFKGFLYDQGVV 207 4444488899**************************************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MTQQQPQPPP PPPPPPPPSN DNVFTYLTTS LGKWQRDQSD VVVRGGTRAC TDCGNRAKRD 60 CGFSRCRTCC KARAFPCSTH VRSTWVPPSR RRLRLPATLD GAGGNGSSGS SSASKRPRLH 120 ECQTDASHSH TSNSNNAITT PKGFHATSIH QDAIFKQSLP NKVRAPAIFR CHRVTAIGDG 180 KVEIAYQVTV RISGHVFKGF LYDQGVVENN GDYSSTPIVF LSTPNPTSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	3e-39	SRS family protein