PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53743.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family MYB_related
Protein Properties Length: 320aa    MW: 34906.1 Da    PI: 7.9584
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53743.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.2e-14100144347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
       PON53743.1 100 PWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 144
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSRTCSQCGN NGHNSRTCTE VCGGVDSGNS GGATTGENAI MLFGVRVTAE GNAFRKSASM  60
NNLSQYEQPP HQDSNAEAGY ASDDVVHASG RSRERKRGTP WTEEEHKLFL LGLQKVGKGD  120
WRGISRNFVK TRTPTQVASH AQKYFLRRNN HNRRRRRSSL FDITTDTFMN SSNMDEDLTV  180
HQEAPSSLPV LPHPPVQPCN LGIFPVSNFP MTLAPLVLPI SPENSAESIA LESGNQAKTP  240
PLITKPIRPI PLHPVLPPPS SKMADLNLNN SFVEPLPLSL KLSTPSSEEE QSPPPPQQQQ  300
QQHPSAFQAM SNGDSIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.21e-81MYB_related family protein