PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53803.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB
Protein Properties Length: 308aa    MW: 34362.1 Da    PI: 4.9741
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.97.3e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l++ +   G  +W+++++  g++R++k+c++rw +yl
       PON53803.1 14 KGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding53.27e-1770111447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++
       PON53803.1  70 LTEAEEQLVIDLHARLGNR-WSKIASRLP-GRTDNEIKNHWNTH 111
                      699****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGHCCWRAV PKLAGLRRCG KSCRLRWTNY  60
LRPDLKRGLL TEAEEQLVID LHARLGNRWS KIASRLPGRT DNEIKNHWNT HIKKKLLKMG  120
IDPVTHEPLN KDDQASNMTE TPQDHANNTT STTKNLTTQT ENHNHLSQES SGSTTANSEL  180
AENSSSSSPA AENSSSGDES ALLLADTLCN DESFMNNLWE DNSKLSPPEL VGDSLWNSCP  240
PSSTTYGDQK VVNYDDMGIL PSLEDNCSSS WLLDCQDFGI QDFGFDNCFD DFELNKALST  300
IEMGQNLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12350.12e-94MYB family protein