PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON53820.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NAC
Protein Properties Length: 180aa    MW: 21309.2 Da    PI: 10.0554
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON53820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM184.62.4e-57251541129
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                 +ppGfrFhPtdeelv++yL+kk+++k+++l +vik+vd+yk+ePwdL++  k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk+++s +
  PON53820.1  25 VPPGFRFHPTDEELVDYYLRKKIASKRIDL-DVIKDVDLYKIEPWDLQElcKIGSdEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYS-R 121
                 69****************************.9***************954555553555**************************************.8 PP

         NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                 ++l+g++ktLvfykgrap+g+k+dW+mheyrle
  PON53820.1 122 HSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 154
                 89*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MLSHKERRVK SPKIWESTMN TFTHVPPGFR FHPTDEELVD YYLRKKIASK RIDLDVIKDV  60
DLYKIEPWDL QELCKIGSDE QNEWYFFSHK DKKYPTGTRT NRATKAGFWK ATGRDKAIYS  120
RHSLIGMRKT LVFYKGRAPN GQKSDWIMHE YRLETNENGS TPQATPQLNI NNHIRLYLSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.13e-99NAC family protein