PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON53971.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

NAC

Protein Properties

Length: 355aa MW: 40670.9 Da PI: 8.1834

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON53971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	157.5	5.5e-49	32	161	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 lppGfrFhP+d+el+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lpkk+ +e+ew+fFs+rd+ky++g+r+nra+ gyWkatg dk+++++ PON53971.1 32 LPPGFRFHPSDQELIVHYLQNKVTSRPLPA-SFIPEIDLYKYNPWELPKKAVFGEEEWFFFSPRDRKYPKGERPNRAAGLGYWKATGIDKPIFNSssgL 129 79**************************.89***********8888899***********************************96655 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g+kk Lvfy gr +kgektdW+m+eyrl PON53971.1 130 SKAIGVKKGLVFYIGRPQKGEKTDWFMKEYRL 161 667*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MLLSVSPIFY SSPMERQTSS SSTNTTSSNL QLPPGFRFHP SDQELIVHYL QNKVTSRPLP 60 ASFIPEIDLY KYNPWELPKK AVFGEEEWFF FSPRDRKYPK GERPNRAAGL GYWKATGIDK 120 PIFNSSSGLS KAIGVKKGLV FYIGRPQKGE KTDWFMKEYR LLDSSIKSPR LKLSMRLDDW 180 VLCRVRFKGK LPKKTHEIQH GHTTEASRCL TEPEQTSFAG ANRDKLITDY IHKDCILLAW 240 ILSGQPVNPM ETIPRADFEE SNNIGNNLNS FYEHGSNRVN YQIVTSTDNC CNLWNGETSE 300 KNEKEIIDKM SYEDNLGRES LAGTGIWGYI QNQSPDDMYN VNLTNELPLT GRYLQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MLLSVSPIFY SSPMERQTSS SSTNTTSSNL QLPPGFRFHP SDQELIVHYL QNKVTSRPLP  60
ASFIPEIDLY KYNPWELPKK AVFGEEEWFF FSPRDRKYPK GERPNRAAGL GYWKATGIDK  120
PIFNSSSGLS KAIGVKKGLV FYIGRPQKGE KTDWFMKEYR LLDSSIKSPR LKLSMRLDDW  180
VLCRVRFKGK LPKKTHEIQH GHTTEASRCL TEPEQTSFAG ANRDKLITDY IHKDCILLAW  240
ILSGQPVNPM ETIPRADFEE SNNIGNNLNS FYEHGSNRVN YQIVTSTDNC CNLWNGETSE  300
KNEKEIIDKM SYEDNLGRES LAGTGIWGYI QNQSPDDMYN VNLTNELPLT GRYLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	1e-71	NAC family protein