PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54046.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 501aa    MW: 57123.5 Da    PI: 8.5224
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.49.9e-17291121099
                 HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 + +++rl++p kf++++g+  + s  + ++ + g +W+++l   k++++++l+kGW +F++   +k g +v+F+++g+sef  +  +f++
  PON54046.1  29 TIQENRLRIPQKFVRKCGE--TLSSSVFVKVPCGSKWKMQL--GKQDDKIWLEKGWADFANHYSIKRGSMVMFRYKGNSEF--HAVIFDT 112
                 567899***********94..57889***************..**********************************9999..7777765 PP
2B350.43.9e-16217316198
                 EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-....TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvlt....kGWkeFvkangLkegDfvvFkldgrsefel 92 
                 ffk+l+ ps+v+++ + l++p +fa ++ ++  ++ +++l  ++gr+W v++  r  +++ + l+     GW eF+++n L++gD+++Fkl + +++++
  PON54046.1 217 FFKALMqPSYVGSKtDHLYVPLDFAMRYIKN--QG-DVMLSVPNGRTWFVEF--RMIPRKfIKLEaricHGWHEFANDNSLEVGDVCIFKLLDGTKTSF 310
                 56666516666666789********999544..43.8***************..5555553333355559********************776566666 PP

                 EEEEE- CS
          B3  93 vvkvfr 98 
                  v+++r
  PON54046.1 311 EVSIVR 316
                 887765 PP
3B348.12e-15369468298
                 EEE-...-HHHHT..T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   2 fkvl.tpsdvlks..grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 fk+  +ps++ +s   +l +p + a+++ +k e+  +++l  ++grsW+  +++   r+++ +  + +GWk+F+ +n++++gD ++Fkl++  + ++ v
  PON54046.1 369 FKIViSPSYSYRSslYLLNIPLDIAKKYIKK-EG--DVVLSVPDGRSWSAHFRFrrlRNGKHAAEIYDGWKGFAVDNNVDVGDLCIFKLINGPKISFEV 464
                 4544133333333336789******999544.44..7***************996666666668889**********************9877777788 PP

                 EEE- CS
          B3  95 kvfr 98 
                  ++r
  PON54046.1 465 YIIR 468
                 8776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MSCGPQGDRN QTVFSSGTPH FFCIIVEETI QENRLRIPQK FVRKCGETLS SSVFVKVPCG  60
SKWKMQLGKQ DDKIWLEKGW ADFANHYSIK RGSMVMFRYK GNSEFHAVIF DTSTVEIDNP  120
YVPVHFDTSV IAMELRMPKE VVVEDDFVKI SDDLLPCPKV RDKPPSHKRM RTNPTGKPLR  180
NSAGLPLELG AIPEHRFTFA ERARILERVP FESDKPFFKA LMQPSYVGSK TDHLYVPLDF  240
AMRYIKNQGD VMLSVPNGRT WFVEFRMIPR KFIKLEARIC HGWHEFANDN SLEVGDVCIF  300
KLLDGTKTSF EVSIVRFDEY ECRQWSQAHK SGAIHVEPVQ SLANDTNSSS VVNARILERA  360
PFESETPFFK IVISPSYSYR SSLYLLNIPL DIAKKYIKKE GDVVLSVPDG RSWSAHFRFR  420
RLRNGKHAAE IYDGWKGFAV DNNVDVGDLC IFKLINGPKI SFEVYIIRVA DDAYGQMIHG  480
GECAKGASKQ NGHVIVKTEI D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-38B3 family protein