PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54047.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 678aa    MW: 76713.6 Da    PI: 8.4549
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.76.6e-1627112899
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 + +l+++ l++p kf++++g  ++ s  + ++ + g +W++kl   k++++++l++GW +F+k   +k g +v+F+++g+sef  +  +f++
  PON54047.1  27 EETLQENKLRIPQKFLRKYG--EALSDSVFVKLPCGSKWKIKL--AKQDNKIWLEEGWPDFAKHYSIKIGSMVIFRYEGNSEF--HAVIFDT 112
                 45667778***********9..458889***************..**********************************9999..7777765 PP
2B340.93.7e-13364459197
                 EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffk+l+ ps+v+ + + l +p +fa+++ ++  ++ +++l  ++  sW  k+++r    +  l +GW+eF+++n L++gD+++Fkl + ++ ++ v+++
  PON54047.1 364 FFKALMePSYVGPKtDHLLVPLDFAARYIKN--QG-DVVLSVPNCGSWFAKFRIRPLNWAARLCNGWREFANDNSLEVGDICIFKLLDGTKISFEVSIV 459
                 5666651566665468899*********544..33.7***************8877777799***********************87656665666665 PP
3B354.52.1e-17550651198
                 EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 ffk+ ++ ++  s++l +p +fa+ +  +++k+++ +++l  ++grsW+  +++   + +++   + +GWk+Fv +n++++gD+++Fkl++  + ++ v
  PON54047.1 550 FFKIVIKLSYRDSNILNVPVHFAKIYikKYIKKKG-DIVLSVPEGRSWSAHFRFkslKVSKCVAQIYDGWKGFVVDNNVEVGDVCTFKLINVPKISFEV 647
                 99*********************777*97776665.9***************998888888888999**********************9887777788 PP

                 EEE- CS
          B3  95 kvfr 98 
                 +++r
  PON54047.1 648 SIVR 651
                 7766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 678 aa     Download sequence    
MSCGPQGDPN QTIYSSATLH FFAVVLEETL QENKLRIPQK FLRKYGEALS DSVFVKLPCG  60
SKWKIKLAKQ DNKIWLEEGW PDFAKHYSIK IGSMVIFRYE GNSEFHAVIF DTSTVEIDYP  120
SIPVHFDKPD IELELRGPKQ EVVEDDSVEI LDDFSSCLKA RAKSPLQCSQ PHKRTRTSPE  180
GESLSNSSDP KSKRSCHSEC ALENSMSKRN LQSSEPEMIG MEKSTLTIIC SFESDSDKST  240
TRRGSIYPIL RRIKPRTGRN EKVAALHKAS VFKSRHPFFK VFIQPSYIYG YDLDNNLEVG  300
DVCVFVLLED VKTVFEVVIF RADGNSETPI SPALEFGAIL EHHLTSIEVA RILERVPFES  360
EKPFFKALME PSYVGPKTDH LLVPLDFAAR YIKNQGDVVL SVPNCGSWFA KFRIRPLNWA  420
ARLCNGWREF ANDNSLEVGD ICIFKLLDGT KISFEVSIVR FDEYECGQWS QAHKGGAEHV  480
ELEQRLMNET KSGGTLNGET STLISPKSLS EKQATACIST HWKTRNKKGL NFIEKSSIPE  540
RAPFESDKPF FKIVIKLSYR DSNILNVPVH FAKIYIKKYI KKKGDIVLSV PEGRSWSAHF  600
RFKSLKVSKC VAQIYDGWKG FVVDNNVEVG DVCTFKLINV PKISFEVSIV RVADDAYRRR  660
TRGGESSKGA SKQNGDVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-32B3 family protein