PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54054.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 288aa    MW: 33173.8 Da    PI: 9.728
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.68.2e-1727109896
                 -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + +l+++ l++p kf++++g  ++ s  + ++ + g +W++ l  + ++++++++kGW +F+k   Lk g +++F+++g+sef     +
  PON54054.1  27 EETLQENKLRIPQKFVRKYG--ETLSNSVFVKLPCGSKWKMHL--TEQDKKIWFEKGWPDFAKHYALKRGSMLTFRYEGNSEF--QAVI 109
                 45566677***********9..458999***************..**********************************9999..5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSCGPQRDRN QTKYSSGTPH FFTIILEETL QENKLRIPQK FVRKYGETLS NSVFVKLPCG  60
SKWKMHLTEQ DKKIWFEKGW PDFAKHYALK RGSMLTFRYE GNSEFQAVIF DTSTVEIDYP  120
SIPVIFDKSD IDLELRDPKE EVVEDDSIEI LDNLSPCPKA REKSPLPCSQ PHKRIRTSTT  180
DKTQSNSAGP RKPDSPSKID GDKSTTRSQK IDEILGRMRT QVYRSEKVAV LQKAFDFRSD  240
RPHFKVVIQP SYNHLVSFLS KTCCTKSVSA KLNLRTRDKC LSKNRAEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-33B3 family protein