PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54056.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 208aa    MW: 24297 Da    PI: 7.5813
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.34.9e-1728112999
                 HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +l+++ l++p kf++++g  ++ s  + ++ + g +W++kl  +kk+++++l++GW +F+k   ++ g +v+F++dg+sef  +  +f++
  PON54056.1  28 ETLQENKLRIPHKFTRKYG--ETLSNSMFVKLPCGSKWKMKL--TKKDNKIWLEEGWPDFAKHYSIRRGSMVMFRFDGNSEF--HAVIFDT 112
                 4566778***********9..458899***************..**********************************9999..7777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MSFRHQRDHN QTVFSSGTPH FFSIILEETL QENKLRIPHK FTRKYGETLS NSMFVKLPCG  60
SKWKMKLTKK DNKIWLEEGW PDFAKHYSIR RGSMVMFRFD GNSEFHAVIF DTSTVEIDYP  120
YIPNHLDKPD IDLELRAPKE KVVEDDYVQI LDNLSPCPKR KENASLPCPQ PLKRMRMSPN  180
ECILENAMSK GDLQSSMPEM IGMENLLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-27B3 family protein