PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54060.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 154aa    MW: 17304.3 Da    PI: 4.5071
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.24.5e-167881598
                -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                r  lp +f++++   k+++  + l  ++grsW+v+l++  ++ ++  l +GW eF+++n+L++gD+++Fkl +r e ++ v +fr
  PON54060.1  7 RQKLPLNFVTTYI--KTQG-YVALSVPNGRSWNVELSItLGSYSEAKLNNGWPEFASDNDLEVGDVCIFKLLNRPEVSFEVFIFR 88
                5579999999994..2343.79999***********88656666699***********************998877777777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MKDLAARQKL PLNFVTTYIK TQGYVALSVP NGRSWNVELS ITLGSYSEAK LNNGWPEFAS  60
DNDLEVGDVC IFKLLNRPEV SFEVFIFRVG EYDCQLLSQG DNANSASKVK GDVRVKTELT  120
ELNRNQNQSQ NSEVNPRGLE IPKGEEEEEK GIQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.18e-10B3 family protein