PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54064.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 472aa MW: 53897.4 Da PI: 6.1595

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.3	2.1e-16	28	112	9	99
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+++ ++lpkkf++e+g ++ s + ++ + g +W+++l rk+ + ++l+kGW +F+k +k g +++F+++g+sef + +f++ PON54064.1 28 ETLRENKIRLPKKFVREYG--ETLSDSVFVKLPCGSKWKMEL--RKHENNIWLEKGWPDFAKHYSIKRGSMLLFRYEGNSEF--HAVIFDT 112 5667788*********9..458889***********..********************************9999..7777765 PP
2	B3	46.8	5.4e-15	210	304	1	90
EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE CS B3 1 ffkvlt.psdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkld.gr.sef 90 ffk+l+ p +v+++ ++++p +fa +++++ + +++l+ +s sW v++++r ++++ l kGW+eF + n L++gD+++Fkl g ++f PON54064.1 210 FFKALMrPTHVGSKaEQFRVPSDFAMRYMKN--LEGDVVLYVPSVGSWFVEFRMRPSRSEscvARLCKGWREFSNGNSLEVGDVCIFKLLdGAkTSF 304 56666514455555789*********877..4558***********996665555447777*******************662444444 PP
3	B3	43.7	5e-14	338	434	1	95
EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltp.sdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffkv ++ +v+++ l +p +fa ++ ++ e+ +++l ++g+ W ++++ k+++r l +GW+eF++ n+L++gD+++F+l + ++ + + PON54064.1 338 FFKVYMQpTYVGSKaEHLDVPLDFAMSYIKN--EG-DVILLGPNGNYWHAQFKMnpLKCGNRlARLCDGWQEFANGNNLEVGDVCIFELLDVDGNKTSF 433 556655404555556679*****999544..33.7***********995555555577777*******************76544444444 PP E CS B3 95 k 95 k PON54064.1 434 K 434 3 PP

Sequence ? help Back to Top
Protein Sequence Length: 472 aa Download sequence
MSPGPLGDTE QSPFSSGTLH FFSIILEETL RENKIRLPKK FVREYGETLS DSVFVKLPCG 60 SKWKMELRKH ENNIWLEKGW PDFAKHYSIK RGSMLLFRYE GNSEFHAVIF DTSTVEIDYP 120 YIPVHSDKSD VDLELQAPKD VVVEDDVEIL DDLLPCPKAR EKSPLPCSQA HKSLRTSHGL 180 DFGAKLERPL TDNERARILE KVPFECEKPF FKALMRPTHV GSKAEQFRVP SDFAMRYMKN 240 LEGDVVLYVP SVGSWFVEFR MRPSRSESCV ARLCKGWREF SNGNSLEVGD VCIFKLLDGA 300 KTSFEVFIVR FAEYEYTQWS QHPLTSIERV PFVSENPFFK VYMQPTYVGS KAEHLDVPLD 360 FAMSYIKNEG DVILLGPNGN YWHAQFKMNP LKCGNRLARL CDGWQEFANG NNLEVGDVCI 420 FELLDVDGNK TSFKVSIDRF AECASLQRSL GVDNATSARK SKGDARVKIE ID

Sequence ? help Back to Top

Protein Sequence Length: 472 aa Download sequence

MSPGPLGDTE QSPFSSGTLH FFSIILEETL RENKIRLPKK FVREYGETLS DSVFVKLPCG  60
SKWKMELRKH ENNIWLEKGW PDFAKHYSIK RGSMLLFRYE GNSEFHAVIF DTSTVEIDYP  120
YIPVHSDKSD VDLELQAPKD VVVEDDVEIL DDLLPCPKAR EKSPLPCSQA HKSLRTSHGL  180
DFGAKLERPL TDNERARILE KVPFECEKPF FKALMRPTHV GSKAEQFRVP SDFAMRYMKN  240
LEGDVVLYVP SVGSWFVEFR MRPSRSESCV ARLCKGWREF SNGNSLEVGD VCIFKLLDGA  300
KTSFEVFIVR FAEYEYTQWS QHPLTSIERV PFVSENPFFK VYMQPTYVGS KAEHLDVPLD  360
FAMSYIKNEG DVILLGPNGN YWHAQFKMNP LKCGNRLARL CDGWQEFANG NNLEVGDVCI  420
FELLDVDGNK TSFKVSIDRF AECASLQRSL GVDNATSARK SKGDARVKIE ID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-33	B3 family protein