PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54065.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 311aa    MW: 35205.1 Da    PI: 8.9961
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.54.1e-127713199
                .--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                + s  + ++ + g +W++kl   +++++++l++GW +F k   Lk g +++F+++g+sef  +  +f+k
  PON54065.1  7 TLSSSVFVKLPCGSKWKMKL--ARQDNKIWLEGGWPDFSKHYSLKRGSMLMFRYEGNSEF--HAVIFDK 71
                466678999999********..**********************************9999..8888876 PP
2B347.14.2e-15206301196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                 ffkv +++++     l +p +fa+++ +++ +  + +l  ++g+ W  +++    + +  r   l +GW+eF+k n+L++gD+++F+l + +++e  +k
  PON54065.1 206 FFKVVMQPSYVYGYHLNVPLDFATRYIKNE-G--DAVLLVPNGNYWCAQFKTsplSCSN-RsARLCNGWQEFAKGNNLEVGDVCIFELLDVDGKEISFK 300
                 556655555555555***********6553.3..69**************886753333.247899*********************876666666555 PP

                 E CS
          B3  96 v 96 
                 v
  PON54065.1 301 V 301
                 4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
TRKYGETLSS SVFVKLPCGS KWKMKLARQD NKIWLEGGWP DFSKHYSLKR GSMLMFRYEG  60
NSEFHAVIFD KSTVEIDYPS IPLHFDNYDV DLELAEDDSP CPKAREKSPL PCSQPPKRMR  120
ASPTQSNLSG PNECVLDSSI VKRNLQSSKP EIIGKPDLPA ETDRDKSSTR RKRVYQIVTS  180
IKTPMDRSKN VAALQKASDF KSKHPFFKVV MQPSYVYGYH LNVPLDFATR YIKNEGDAVL  240
LVPNGNYWCA QFKTSPLSCS NRSARLCNGW QEFAKGNNLE VGDVCIFELL DVDGKEISFK  300
VSIVHRAESA S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-42B3 family protein