PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54066.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 126aa    MW: 14233.4 Da    PI: 10.8277
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.91.4e-16401211298
                 HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +s+ l+lp++f+++h  +k +++tl++    +rsW vkl   ++s++y+l++G ++F+++  L  gD+++ +l++r++  l+v++fr
  PON54066.1  40 QSSVLRLPNDFVKSHIDQKVQTVTLKV---GNRSWLVKL--LRSSSGYFLSGGFSKFARQTSLSPGDVCIYELTERNQVVLKVSIFR 121
                 456799*********777778655554...55*******..*********************************9999999999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
KFRLGHFTQS PSPLRDTIAF EAAEKFSSEQ PFFKVIVGKQ SSVLRLPNDF VKSHIDQKVQ  60
TVTLKVGNRS WLVKLLRSSS GYFLSGGFSK FARQTSLSPG DVCIYELTER NQVVLKVSIF  120
RFTVVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-08B3 family protein