PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54067.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 512aa    MW: 57795.7 Da    PI: 10.3855
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.84.1e-1818109199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 ffk+ + +  ++++ l +pkkf++++gg+   s  + l+ + g +W++ +  +k++gr+++ +GWk+F++   L+ gD vvF+++g+sef  +v +f++
  PON54067.1  18 FFKIILEETLGNKK-LQIPKKFVTKYGGS--LSSRVFLKLPCGSRWKIGV--TKSDGRVWIDEGWKKFADYYSLCRGDLVVFRYEGNSEF--HVILFDT 109
                 67777666666665.***********998..7779***************..**********************************9999..9988886 PP
2B3604e-19244340197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 f  ++ ps v+ ++ l+lp  fa+++  +  ++++++l+ ++gr+W+vk+++  r++s +  + +GWk F+++n+Lk+gD+++F l++r++  + v+++
  PON54067.1 244 FMVAMQPSFVGDKSALILPSLFATKYLCS--KNIDVILKVSDGRTWSVKYSFrlRNGSPKAKFDRGWKAFARENDLKVGDVCIFVLTKRTGILFEVTIL 340
                 66788899999***************544..5679***************99888888889************************99887665666665 PP
3B357.32.9e-18412506399
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 +v +++  l ++r+  p +fa+++ +k  +++ +tl+  + rsW vkl    + ++y +++GW  F+k+n Lk +D+++F+l++r++  l+v++fr+
  PON54067.1 412 QVVVQPGQLDQCRVHAPASFAKSCFNK--RTQIMTLQVGTERSWPVKLLAYPSESEYKFSAGWAAFAKENSLKPRDICIFELIKRNQVVLKVSIFRQ 506
                 66778889999*************877..45589999***********99999999*****************************9999******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    
MTLGSPSQRK FCPTSPHFFK IILEETLGNK KLQIPKKFVT KYGGSLSSRV FLKLPCGSRW  60
KIGVTKSDGR VWIDEGWKKF ADYYSLCRGD LVVFRYEGNS EFHVILFDTS TVERDYLSNP  120
NHFQKHFIDE QSHEFVKEET EDDVSVQVLD RVSPSPKTRA KSPLPCSRPQ KKMKTSPFVK  180
TQSNLSPLRS KVKFDFSDEE VGDKSMPPRS MKLEHFAKKQ TLNAKQKAEA LKRASGFKSK  240
DPFFMVAMQP SFVGDKSALI LPSLFATKYL CSKNIDVILK VSDGRTWSVK YSFRLRNGSP  300
KAKFDRGWKA FARENDLKVG DVCIFVLTKR TGILFEVTIL SENGVANSTV SPELEVMPKG  360
SLSIKLESDN TMNKITAMST PWGCRKPLPS SSGVSRASKA ASHFFSSNPH FQVVVQPGQL  420
DQCRVHAPAS FAKSCFNKRT QIMTLQVGTE RSWPVKLLAY PSESEYKFSA GWAAFAKENS  480
LKPRDICIFE LIKRNQVVLK VSIFRQTGLG QH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-48B3 family protein