PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON54152.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 470aa MW: 51047.7 Da PI: 7.0681

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON54152.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.9	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl PON54152.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.5	1.1e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l PON54152.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPVTHKPKT DALGSGSGNP KDAANLSHMA QWESARLEAE ARLVRESKLV TNNNSNIPQA 180 LPHQLGSANT NPAHHFINRA GGSVAPPPCL DVLKAWQGAW TKSSNNNNRA ECNTLADMMA 240 MDDLESPTST LNFPDANPHY SFPNMTQTPH VGGFGTTNTT TTTTTTTHDI HHHHHQHKGV 300 ESEHNVNGWK SCYSTTTTPT ITKVVNINDD HHHHLDNNSH MVATPTAPPE FKERNMDTTN 360 TMSLQDMAFA CTDGGAWFVD GFRAGSGGAG DSMAVPAGAL SNIMEGFADV FVYNSDEPNS 420 LAAAAGENSS NGGGSGEGSC GASGIFEENK SYWNSILSLV NASPAGSPVF

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWTNY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPVTHKPKT DALGSGSGNP KDAANLSHMA QWESARLEAE ARLVRESKLV TNNNSNIPQA  180
LPHQLGSANT NPAHHFINRA GGSVAPPPCL DVLKAWQGAW TKSSNNNNRA ECNTLADMMA  240
MDDLESPTST LNFPDANPHY SFPNMTQTPH VGGFGTTNTT TTTTTTTHDI HHHHHQHKGV  300
ESEHNVNGWK SCYSTTTTPT ITKVVNINDD HHHHLDNNSH MVATPTAPPE FKERNMDTTN  360
TMSLQDMAFA CTDGGAWFVD GFRAGSGGAG DSMAVPAGAL SNIMEGFADV FVYNSDEPNS  420
LAAAAGENSS NGGGSGEGSC GASGIFEENK SYWNSILSLV NASPAGSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-107	MYB family protein