PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54770.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 207aa    MW: 22656.1 Da    PI: 8.6237
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54770.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.52e-32112168158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 +ep++VNaKQy++Il+RRq+Rak+e+e+k   ksrkpylheSRh hAlrR+Rg+gGrF
  PON54770.1 112 EEPVFVNAKQYHGILRRRQSRAKAESENKA-VKSRKPYLHESRHLHALRRARGCGGRF 168
                 69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MTSSVHGLSD NCESDESQKN SESQIQSSSA PGMSHTVVTT PNVQYASPPQ FGAGQAVAPA  60
AYPYPDPYYR SIFAPYDAQP YPPQPYGGQP MVHLQLMGIQ QAGVPLPSDA VEEPVFVNAK  120
QYHGILRRRQ SRAKAESENK AVKSRKPYLH ESRHLHALRR ARGCGGRFLN AKKNEKEQDE  180
VAPGDKSQPN INLNSDKNER APADGTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.28e-60NF-YA family protein