PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON54867.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YA
Protein Properties Length: 245aa    MW: 26797.2 Da    PI: 9.72
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON54867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.6e-3286142158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVNaKQy++Il+RRq+Rak+e+++kl +k+rkpylheSRh hAl+R RgsgGrF
  PON54867.1  86 DGPIYVNAKQYHGILRRRQSRAKQEAQNKL-IKNRKPYLHESRHLHALNRVRGSGGRF 142
                 57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MISSESGEDA MSSEGVEDQM KPVFLLSNTD FILNPSQVSC SHSMAGVPYP YADPYFGGLL  60
TSYGPRALMV GIPPARVPLP LDLADDGPIY VNAKQYHGIL RRRQSRAKQE AQNKLIKNRK  120
PYLHESRHLH ALNRVRGSGG RFLSKKQLQH QFPDSTSATT ATSGSSHCAS DSMKMNQKKD  180
TMELESPRSG FPEYVTMVTS RSDTTTVSDN TGRRFPGAAS HVGKAMQCSG RLLHGGNQHC  240
ASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17590.23e-43NF-YA family protein