PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON55126.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 344aa    MW: 38666.4 Da    PI: 9.1284
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON55126.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH382.9e-12166213355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h  +Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  PON55126.1 166 KDHILAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYMKQLQ 213
                 56999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDISSIKGLS ELGMNDPSFI HQWQMNSLDE LSMLPNLETS LGESLLHPHS HSSFNLKASL  60
DNNSHIGIDR SMKHHKPNGW NSNEISQLSN PQVASSPNLY SFVGSNYTNQ MGLFKPKEEA  120
VHLKSINTLP SDVLISQGCF PSQNYALKAN QGPRRIGTST KLSQTKDHIL AERKRREKLS  180
QRFIALSAIV PGLKKMDKAS VLGDAIKYMK QLQEKVKTLE EQTRKKNMES VVFVKKSQLL  240
TDKDNRSSNE NFSGGPFNEP LPEIEARVCD NNVLMRIHCE KKKGVMEKTI AEIEKLHLTV  300
INSSCMTFGS SALDVTIIAQ MDMEFSLTMQ DLVKNLRLAF NLFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERKRRE
2173178RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-64bHLH family protein