PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON55348.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

GeBP

Protein Properties

Length: 212aa MW: 24282.8 Da PI: 10.776

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON55348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	54	4.9e-17	22	113	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 +f+ l++e+De +lL+ +++ ++ s+s ++ ++ s+ +++s+sq+++K+rrL+ K++ + ++ + ++++hd k +++++kiWg+ PON55348.1 22 QFRLLFTESDETLLLKTFLKVSKHSSPSSSTITSPNLARIRTSLGLRFSHSQIIDKLRRLRLKYHSQART-----KSLIKTPHDIKLYNIARKIWGK 113 57889**************99999999999*****************************99999.....6789**************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence
MSTLKTKTKL PSTPSKPSSY DQFRLLFTES DETLLLKTFL KVSKHSSPSS STITSPNLAR 60 IRTSLGLRFS HSQIIDKLRR LRLKYHSQAR TKSLIKTPHD IKLYNIARKI WGKKTQHKRL 120 RHAKKEEEEP QTSRGSEGFR AESEEVSRGS PENGEVLEKG SVCLDEEKVR SVRERWMVLR 180 MEEAELMAQK AELAKEQVKL VIQAFRSSSG TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	8e-10	GeBP family protein