PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON55660.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 221aa    MW: 24678.3 Da    PI: 9.7773
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON55660.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.53.6e-18182214335
        GATA   3 nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  Cgt +Tp+WR+gp g+k+LCnaCG++yrk+++
  PON55660.1 182 DCGTNSTPMWRKGPLGPKSLCNACGIKYRKQEE 214
                 7*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MNEQLREFQM IQEGVIGFSY RPHNNPSGFV DLTLRLGLPP YNYDQNIGQS SQQASLFNQA  60
MQYGCGNINN ANKSYSGPIN HPEKYKPTGA FVGQTSNNGS KRASESIQYG PSYSTDPNKS  120
AFPPEPEMKN HILLNPSATN SNNTTDRTNT RAREGTSRRN KKKRALPAPK IEQEDKRCSN  180
QDCGTNSTPM WRKGPLGPKS LCNACGIKYR KQEERKAEEA N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.13e-14GATA family protein