PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON55712.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family B3
Protein Properties Length: 80aa    MW: 9074.31 Da    PI: 10.5546
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON55712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.78.9e-133751984
                -HHH.HTT....---..--SEEEEEETTS-EEEEEE...EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE CS
          B3 19 pkkfaeeh....ggkkeesktltledesgrsWevkliy.rkksgr..yvltkGWkeFvkangLkegDfvvFkl 84
                p+ f++++     g+  + ++ ++++++g +W+++++  r +++r   v ++GW +Fv++ +Lk gD ++++ 
  PON55712.1  3 PNGFFRNFfpahRGSGGGAVDFMVRNQNGLTWTFRMSNiRTGPDRykLVVSDGWLQFVRDRKLKGGDCLTIYK 75
                555555555555556668899***************777777777668889*******************993 PP
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    
MVPNGFFRNF FPAHRGSGGG AVDFMVRNQN GLTWTFRMSN IRTGPDRYKL VVSDGWLQFV  60
RDRKLKGGDC LTIYKEGGND
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01500.13e-09B3 family protein