PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56009.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

ERF

Protein Properties

Length: 233aa MW: 25625.1 Da PI: 6.0906

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.9	1.6e-15	60	111	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 + y+GVr++k g+Wv+e+r p k+ r +lg+f ++++Aa+a++ a+++ +ge PON56009.1 60 PVYRGVRQRK--GKWVCELRQP---HsKNSRLWLGTFPSPDMAARAYDVAALAVRGE 111 68**9987..**9995...2245*********************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MNFTTEESSS SSSTSSSGHV NIVSGNKPST ATTTNTSSTV NSRQQKRKSG RKKFQETRHP 60 VYRGVRQRKG KWVCELRQPH SKNSRLWLGT FPSPDMAARA YDVAALAVRG ESASLNFPES 120 VMREHPQQVI DSPSSTSSAA AVADHHEVVV HHDQGQRARS TTDDQASSLA PCMEAAEESR 180 NIAYLDEEEL FNMPELLDSM AEGLILTPPG MQKGFSWDDY SSGDSVDFAL WTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25470.1	1e-30	ERF family protein