PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56014.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 209aa    MW: 21617.8 Da    PI: 4.8129
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56014.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172977355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                y+GVr+++ +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  PON56014.1 29 YRGVRRRS-SGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 77
                9****888.8*********94....478***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MHYSNSGSSS ISSTTTNASS VSSGGGRSYR GVRRRSSGKW VSEIREPRKP NRIWLGTFPT  60
PEMAAVAYDV AALALKGQDA EINFPNSASS LPVPASTSPR DIQAAAASAA AAIGAAAAAM  120
GAGAVKEGSN SPGGRIGGGS QGQDIVLAPE RSGSANYGEY VDEDLIFDMP NVLVNMAEGM  180
LLSPPRLDIA GDADHEFENA GDQNLWKFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133139GGRIGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-36ERF family protein