PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56353.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GATA
Protein Properties Length: 191aa    MW: 20992.8 Da    PI: 10.0056
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.1e-1984117134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
  PON56353.1  84 CSDCNTTSTPLWRSGPRGPKSLCNACGIRQRKAR 117
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MMDKINGVDH HDQDHDVMDK ISSLNYNHKG SKSSVKWMSS KMRLIQKMSN NNPQKGTTAT  60
TLIIDHNSES HNVISTSTTT VRVCSDCNTT STPLWRSGPR GPKSLCNACG IRQRKARRAM  120
AEAAAAANAN LVVTSATTTT ASYKIKEKKH WSGNLKNKYN SKLLDTSGVF PQDVTEAALL  180
LMELSYGFVD S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.18e-22GATA family protein