PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON56954.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 541aa    MW: 59205.4 Da    PI: 6.2779
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON56954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS420.41.6e-1281635271374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv+ L++cAe v+ g+l+la +l+++++ l  + +    + ++a yf  AL++r++++          ++ s     e    ++ f+e++P+lkf+h+t
  PON56954.1 163 LVHMLVTCAESVQRGELALAGSLIENMQALltRVNVNCGIGKVAGYFIDALNRRVFSTAG--------RTGSAGAAYEDEVLYHHFYEACPYLKFAHFT 253
                 689**************************9645555579******************222........22222335555678899************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqa+lea++ +++vH+iDf++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa+fA++++v+f f+ ++a+rled+++++L+v
  PON56954.1 254 ANQAMLEAFNDHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGRDSLREVGLRLADFARSVNVRFAFRGVAATRLEDVKPWMLQV 352
                 ************************************************************************************999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +p+Ea+aVn+++qlhrll ++++ +s +  vL  ++sl+Pk+++vveqeadhn++ Fl+rf+eal+yys++fdslea    + + ++ + +++++rei+
  PON56954.1 353 SPKEAVAVNSIMQLHRLLGSDMTRDSGIGIVLGWIRSLNPKIMTVVEQEADHNQAGFLDRFTEALYYYSTMFDSLEAC---AMQPEKALAEMYIQREIC 448
                 ***************************************************************************999...467777888899****** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 nvv+ceg++r+erhe l+kW +rl +aGFkp++l+++a kqa++ll  ++ +gy vee++g+l+lgW++r+L+++SaWr
  PON56954.1 449 NVVCCEGSARVERHEPLAKWTNRLVQAGFKPLHLGSNAFKQASMLLTLFSAEGYCVEEKEGCLTLGWHSRSLIAASAWR 527
                 ******************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MGPYDSANSA GSSNGSSSSS SAKPKDNIDG LLAGAGYRVR SSDLRHVAQR LERLETVMVN  60
SPASQISHLA SDAVHYNPSD IASWVDSILS ELNHPFPLSS DLPDFPDLMI TDPTVGADVW  120
AADPRPHQNI SPPPPLLPLP PLHQHHHPLT VVTAMEEDSG IRLVHMLVTC AESVQRGELA  180
LAGSLIENMQ ALLTRVNVNC GIGKVAGYFI DALNRRVFST AGRTGSAGAA YEDEVLYHHF  240
YEACPYLKFA HFTANQAMLE AFNDHDCVHV IDFNLMHGLQ WPALIQALAL RPGGPPLLRL  300
TGIGPPSPDG RDSLREVGLR LADFARSVNV RFAFRGVAAT RLEDVKPWML QVSPKEAVAV  360
NSIMQLHRLL GSDMTRDSGI GIVLGWIRSL NPKIMTVVEQ EADHNQAGFL DRFTEALYYY  420
STMFDSLEAC AMQPEKALAE MYIQREICNV VCCEGSARVE RHEPLAKWTN RLVQAGFKPL  480
HLGSNAFKQA SMLLTLFSAE GYCVEEKEGC LTLGWHSRSL IAASAWRAVP DPNSPHGIIK  540
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-140GRAS family protein