PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON56982.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

Protein Properties

Length: 415aa MW: 47750.2 Da PI: 9.5441

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON56982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	54.9	1.6e-17	6	94	2	94
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 f +l+ s++ + ++l++p +f++++ + s+ t++ ++g +W+v l +k ++++++ +GW++Fv+ g+++g f++F+++g+s+f+ +v PON56982.1 6 FHKLIYSSTIQAKQLRIPDSFVKKFRDE--LSTVATITVPDGHVWRVGL--KKADNKIWFHDGWQDFVERYGIRVGYFLIFRYEGNSTFNVFV 94 56788899999999******999755..888999999******..********************************99995544 PP
2	B3	60	4e-19	301	391	4	98
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 vl ps+ + ++++lp fae++ +g++ ++l++++gr+W v++ yr+++ l++GW eF +n+L egD++vF+l + +e l+v+vfr PON56982.1 301 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQTSDGRQWPVRCLYRGGR--AKLSQGWYEFSLENNLGEGDVCVFELLKMKEVVLKVTVFR 391 78899****************877743...5***********665555..66*********************998888889999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MPRSYFHKLI YSSTIQAKQL RIPDSFVKKF RDELSTVATI TVPDGHVWRV GLKKADNKIW 60 FHDGWQDFVE RYGIRVGYFL IFRYEGNSTF NVFVFNLSTS EINYQHPLNS SQAIYSNRYQ 120 FFEEMEDDSD EILGFSPARM TTGPLKAKLF GERAEQMTSG KVFNPPSLQN LFNGSKLNCI 180 NWGNEGNLHP AKGAGNFEAE NQLTRDIGVQ FNVMEPKKSA DEVKLQNSEE DIRRTKKAGR 240 KKRKIESNGQ ESSIRPDETD MRFRFYESAS ARKRTVTAEE RERAVNTAKT FEPTNPFCRV 300 VLRPSYLYRG CIMYLPSCFA EKNLNGVSGF IKLQTSDGRQ WPVRCLYRGG RAKLSQGWYE 360 FSLENNLGEG DVCVFELLKM KEVVLKVTVF RVLEDAGMIN QPSQHTVSQS KLIRN

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MPRSYFHKLI YSSTIQAKQL RIPDSFVKKF RDELSTVATI TVPDGHVWRV GLKKADNKIW  60
FHDGWQDFVE RYGIRVGYFL IFRYEGNSTF NVFVFNLSTS EINYQHPLNS SQAIYSNRYQ  120
FFEEMEDDSD EILGFSPARM TTGPLKAKLF GERAEQMTSG KVFNPPSLQN LFNGSKLNCI  180
NWGNEGNLHP AKGAGNFEAE NQLTRDIGVQ FNVMEPKKSA DEVKLQNSEE DIRRTKKAGR  240
KKRKIESNGQ ESSIRPDETD MRFRFYESAS ARKRTVTAEE RERAVNTAKT FEPTNPFCRV  300
VLRPSYLYRG CIMYLPSCFA EKNLNGVSGF IKLQTSDGRQ WPVRCLYRGG RAKLSQGWYE  360
FSLENNLGEG DVCVFELLKM KEVVLKVTVF RVLEDAGMIN QPSQHTVSQS KLIRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-141	B3 family protein