PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57020.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

LBD

Protein Properties

Length: 179aa MW: 19583.6 Da PI: 8.0053

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.8	1.2e-40	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+l+r+CakdC++apyf + + +kfa+vhk+FGasnv+k+l++lp + r da+ssl+yeA+ar+rdPvyG++g i++lq+q+++lk +la++++ PON57020.1 6 PCASCKLLKRRCAKDCIFAPYFHSVDLHKFAIVHKVFGASNVSKMLQELPVHCRADAVSSLLYEANARMRDPVYGCAGAISQLQNQVSELKMQLAVAQA 104 7**********************************************************************************************9998 PP DUF260 100 e 100 e PON57020.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MGRNSPCASC KLLKRRCAKD CIFAPYFHSV DLHKFAIVHK VFGASNVSKM LQELPVHCRA 60 DAVSSLLYEA NARMRDPVYG CAGAISQLQN QVSELKMQLA VAQAEILCIK MQQDPATAMV 120 GGTPPQTLDS ADYIGQYEKS CFLGDNNGLM MTPPHYHNLA SSATSVVIHG SLNREYFGI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	6e-66	LBD family protein