PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57028.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family HD-ZIP
Protein Properties Length: 718aa    MW: 78782.4 Da    PI: 6.0473
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.6e-1845100156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 +++ +++t++q++e+e++ +++++p+ ++r+eL+++lgL+  qVk+WFqN+R++++
  PON57028.1  45 KKRYHRHTQHQIQEMEAFLKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMR 100
                 688999***********************************************998 PP
2START205.42.3e-642364561206
                 HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
       START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                 ela +a++el+++a+ +ep+W++s       +n+de++++f+++ +     ++ ea+r++ vv+m++  lve+++d++ qW++ +     +a+ le +s
  PON57028.1 236 ELAVAAMEELIRMAQMGEPLWTTSLdgasVVLNEDEYIRTFPRGIGptpagFRCEASRETSVVIMNHISLVEIFMDVS-QWSTVFSgivsRAMALESLS 333
                 57899********************999999************999********************************.******************** PP

                 TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
       START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                 +       galq+m++e  ++splvp R++++vRy++q  +g w++vdvS+d+ ++ p     vR++++pSg+li++++ng+skvtwvehv++++r +h
  PON57028.1 334 TRvagnfnGALQVMTSEVRVPSPLVPtRESYYVRYCKQNADGIWAVVDVSLDNLRPSPA----VRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVH 428
                 *9999***************************************************995....************************************ PP

                 HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
       START 179 wllrslvksglaegaktwvatlqrqcek 206
                 +l+++lv+sg+a+gak+wvatl+rqce+
  PON57028.1 429 NLYKQLVNSGHAFGAKRWVATLDRQCER 456
                 **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 718 aa     Download sequence    
MFKPNMMEGG HQLHHLLDDD IFDSAAESGG KNQEGGTSGD GRPKKKRYHR HTQHQIQEME  60
AFLKECPHPD DKQRKELSRE LGLEPLQVKF WFQNKRTQMR TKHERHENTH LHIENEKLRA  120
DNMRCREALR NASCPNCGDP TAIGEMSFDE HHLRLENARL REEIDRISVI AAKCVGSPVV  180
NYPLLSSPVP PHPLELGVGN FGPQAGMGGE MCGGATEDLL CPMGEPNETD KPMITELAVA  240
AMEELIRMAQ MGEPLWTTSL DGASVVLNED EYIRTFPRGI GPTPAGFRCE ASRETSVVIM  300
NHISLVEIFM DVSQWSTVFS GIVSRAMALE SLSTRVAGNF NGALQVMTSE VRVPSPLVPT  360
RESYYVRYCK QNADGIWAVV DVSLDNLRPS PAVRCRRRPS GCLIQEMPNG YSKVTWVEHV  420
EVDDRGVHNL YKQLVNSGHA FGAKRWVATL DRQCERLASA MATNISTGDV GVITNQDERK  480
SMLKLAERMV ISYFDGVSAS TTHTWTTLSG TGADDVRVMT RKSVDDPGSP SGVVLSAATS  540
FWLPVPPKIV FDFLRDENSR SQWDILSNGG VVQHMAHIAN GRDTGNCVSL FRVNSANPSQ  600
SNMLILQESC TDQTTSFVIY APVDIVAMNI MLNDGDPDYV ALLPSGFAIL PDGLTTHSCG  660
GVSGEPSSTG GSLLTVAFQI LVDSVPTAKL SFGSLATVSN LIACTIERIK ASLSCKIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein