PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57214.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

HB-other

Protein Properties

Length: 957aa MW: 106974 Da PI: 5.8201

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	15.4	3.1e-05	729	789	1	54
TT--SS--HHHHHHHHHHHHHSSS-..-HHHHHHHHHHC.....TS-HHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknryp..saeereeLAkkl.....gLterqVkvWFqNrRak 54 +rkRt +++eq+e e + e+++ + +a+ ++ ++kl ++t +q k+W Nr+a+ PON57214.1 729 KRKRTIMNDEQVEMIEMALENSPDMhrNAALIQSWSDKLschgsEVTSSQLKNWLNNRKAR 789 79****************966551166779**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MRYNKEEPTT SATQAIDLIS AVKDLHGLSS QELNKLLRDS ENFTIQYVTE KGSVIKIEME 60 KLAGFLPLHL IAVLMSAGRE EALSSYLLCG LRLLHSLCDL APRHAKLEQI LLDDVKLSEQ 120 LLDMVFYLLI VFGRVEQRNR DFGILPFMHS ALVACSLHLL TGFISSQWQD LAHVLLAHPK 180 VDIFMDAAFG AVCATIKFLE IKLSCQHTNF CLTSSLTAEQ VVNYLCQQCE ASLQFLQSLC 240 QQKMFRERLL RNKELCGKGG ILFLAQAILK LNVMPHFTES PRVVASVSRM KARVLSILVS 300 LCEAESISYL DEVASTPCSL DLSKSVASEV LDLLKAALGR DPRRLIPCSD RNYPMGLLQL 360 NAMRLADIFS DDSNFRSYIT IYFTKVLTAI FLLPHGDFLS SWCSSELPLK EEDGSIEYDL 420 FASSGWVLDV LSSTNLQNPT SLELMVVSNS MLQASYAHQR TSLFVKVIAN LHCFVPTICE 480 EQERNLFLHK FMECLQMDPS NVLPGFSFTS DVPKAATVCR NLRSLLSHAE SLIPNFLNEE 540 DVQLLRVFYN QLQSLLISPE YEENRVQERK CEESISWDKF AKLDLNEHNQ EAQSAGGCSS 600 PLSRKEHPNL NNRSGNLKEE MSETSAYQDI DQKYFNSEHI SQEADAVRED KCKSSMSAFG 660 GITEINKDAQ NVETSGSDTS STRGKNVADQ MDNSEFPKLG VATKESAHGR NVEEKKIETV 720 QSEEKQRRKR KRTIMNDEQV EMIEMALENS PDMHRNAALI QSWSDKLSCH GSEVTSSQLK 780 NWLNNRKARL ARTGKDVRAT PEVDSSFPEK QGGPGPRSSD SPGTPGEDAS VQPNVGRDPQ 840 AITWRSSTAE NSEASPAVGP TEFLQCEQGK HVILMGEAGE EIAKGKVFQV GGKWYGKNLD 900 ELRTCVVEIL ELKVKRGTRL PHPAVSTGVS FEEAETRIGV MRVMWDSSRI FASRSSK

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MRYNKEEPTT SATQAIDLIS AVKDLHGLSS QELNKLLRDS ENFTIQYVTE KGSVIKIEME  60
KLAGFLPLHL IAVLMSAGRE EALSSYLLCG LRLLHSLCDL APRHAKLEQI LLDDVKLSEQ  120
LLDMVFYLLI VFGRVEQRNR DFGILPFMHS ALVACSLHLL TGFISSQWQD LAHVLLAHPK  180
VDIFMDAAFG AVCATIKFLE IKLSCQHTNF CLTSSLTAEQ VVNYLCQQCE ASLQFLQSLC  240
QQKMFRERLL RNKELCGKGG ILFLAQAILK LNVMPHFTES PRVVASVSRM KARVLSILVS  300
LCEAESISYL DEVASTPCSL DLSKSVASEV LDLLKAALGR DPRRLIPCSD RNYPMGLLQL  360
NAMRLADIFS DDSNFRSYIT IYFTKVLTAI FLLPHGDFLS SWCSSELPLK EEDGSIEYDL  420
FASSGWVLDV LSSTNLQNPT SLELMVVSNS MLQASYAHQR TSLFVKVIAN LHCFVPTICE  480
EQERNLFLHK FMECLQMDPS NVLPGFSFTS DVPKAATVCR NLRSLLSHAE SLIPNFLNEE  540
DVQLLRVFYN QLQSLLISPE YEENRVQERK CEESISWDKF AKLDLNEHNQ EAQSAGGCSS  600
PLSRKEHPNL NNRSGNLKEE MSETSAYQDI DQKYFNSEHI SQEADAVRED KCKSSMSAFG  660
GITEINKDAQ NVETSGSDTS STRGKNVADQ MDNSEFPKLG VATKESAHGR NVEEKKIETV  720
QSEEKQRRKR KRTIMNDEQV EMIEMALENS PDMHRNAALI QSWSDKLSCH GSEVTSSQLK  780
NWLNNRKARL ARTGKDVRAT PEVDSSFPEK QGGPGPRSSD SPGTPGEDAS VQPNVGRDPQ  840
AITWRSSTAE NSEASPAVGP TEFLQCEQGK HVILMGEAGE EIAKGKVFQV GGKWYGKNLD  900
ELRTCVVEIL ELKVKRGTRL PHPAVSTGVS FEEAETRIGV MRVMWDSSRI FASRSSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	727	732	RRKRKR