PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57348.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

TCP

Protein Properties

Length: 214aa MW: 23441.6 Da PI: 9.8276

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57348.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133.3	2.2e-41	86	189	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa.ksk 98 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++++ +s+ +++ PON57348.1 86 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSIPSQLRSSYyNPN 184 789******************************************************************999999999999998888866666655555 PP TCP 99 ksqks 103 +s + PON57348.1 185 FSVQA 189 55544 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MEGGDDYHHH HHHHQHQHRH HDRPNFPFQL LEKKEEETSC TSSSTAYPSL AISASTDHNT 60 TSCSTSTNAT STTVAASAET SSKKPPPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT 120 RELGHKSDGE TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SIPSQLRSSY 180 YNPNFSVQAA RRSTSSLFSG IGLSPPSDSX PRRF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	4e-40	TCP family protein