PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57378.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MYB

Protein Properties

Length: 379aa MW: 42380.9 Da PI: 6.8578

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.1	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl PON57378.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	48.1	2.7e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l PON57378.1 67 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ 120 TGHDGHSSRD EFSASNNSHQ ISKGQWERRL QTDIHMAKQA LCEALSLDKP IDHNQDHHHN 180 LCESKPSIIN NITTTFQTST HDHATTTKSH QPSSPYASNA ENIARLLENW MKITPKSGQS 240 SSEPARDTLH NTVLYPVKGT STTTYSSSSE GAQSGTTTPD YHINNNNQAT NTFHEYSLFS 300 FNSSAASESV FSADETTTAA NLTPETASTV FQDESKPHNN MMEPQAPLTL LEKWLLDDGA 360 AQGHEDLINM SLEDSAALF

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MGRPPCCDKV GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ  120
TGHDGHSSRD EFSASNNSHQ ISKGQWERRL QTDIHMAKQA LCEALSLDKP IDHNQDHHHN  180
LCESKPSIIN NITTTFQTST HDHATTTKSH QPSSPYASNA ENIARLLENW MKITPKSGQS  240
SSEPARDTLH NTVLYPVKGT STTTYSSSSE GAQSGTTTPD YHINNNNQAT NTFHEYSLFS  300
FNSSAASESV FSADETTTAA NLTPETASTV FQDESKPHNN MMEPQAPLTL LEKWLLDDGA  360
AQGHEDLINM SLEDSAALF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62470.2	1e-111	MYB family protein