PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57387.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family Nin-like
Protein Properties Length: 314aa    MW: 36194 Da    PI: 5.3467
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.73.5e-26157207252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +k++s ++ls+y+++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl
  PON57387.1 157 SKTLSRQVLSQYYYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 207
                 689*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MVAKDENPFD PFSTQFLSSP LNFSGDGYQF STNFEQNWQN ELPIQESILL DAVPLMEYYP  60
TDPLYSTVEL EPSPSIIQDD ILINNGNGLE VWDDIGVLGF EANYNQKKPL LLLCNDPSNI  120
NGDDQKGKEK MKKEKKIVER RLACRISSEE KSSTSASKTL SRQVLSQYYY MPITQAAKEL  180
NVGLTLLKKR CRELGIRRWP HRKLMSLKTL IKNVQDLGKE EGGHQENDSK LKNAIELLER  240
EKKLVEEVPD IQLDDTTKRL RQACFKANYK KRKLRIMDSD HDHQSGLNTK YLEEEDEEIK  300
SLLSDLFSST NHLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.11e-43Nin-like family protein