PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON57482.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

MIKC_MADS

Protein Properties

Length: 217aa MW: 24907.6 Da PI: 9.4778

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON57482.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	94.7	4.3e-30	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s PON57482.1 9 KRIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 79***********************************************86 PP
2	K-box	72.9	9.7e-25	92	180	11	98
K-box 11 eakaeslqqe.lakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ +++e + k+ie L+ ++R+l G++L+s+sl eLqq+e+qLe+sl kiR++Kn+l++eqi++l++ e++l e+n +Lr++ PON57482.1 92 HEHQSAMSKEgNFSMAKKIEHLEVSKRKLFGDGLDSCSLHELQQIENQLERSLGKIRARKNQLYKEQIDHLKEEERSLLEQNAKLREQC 180 3334444444155899**********************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MVRGKTQMKR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 RCISINKTIE RYTQRKANDG GLRSAKAVSE DHEHQSAMSK EGNFSMAKKI EHLEVSKRKL 120 FGDGLDSCSL HELQQIENQL ERSLGKIRAR KNQLYKEQID HLKEEERSLL EQNAKLREQC 180 GMVPLLPSTE PPEVVHNIDQ NMEVETELFI GLPERRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22950.1	3e-78	MIKC_MADS family protein