PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57629.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family NF-YB
Protein Properties Length: 170aa    MW: 18794 Da    PI: 6.8849
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57629.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB160.82.1e-50190897
       NF-YB  8 lPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                +Pianv+rim+++lP +akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa+++lGf+dy+epl++yl++yre eg++
  PON57629.1  1 MPIANVIRIMRRILPPHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRENEGDR 90
                8**************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MPIANVIRIM RRILPPHAKI SDDAKETIQE CVSEYISFIT GEANERCQRE QRKTITAEDV  60
LWAMSKLGFD DYIEPLTLYL HRYRENEGDR VTIRGASSVD VNPFMKRPAV DYGAASALGV  120
AAFAPNTTTT SFHVGHHHNG FFGYFKDSSG AGGSSNQAAV ANGEQHGQFK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47670.23e-61NF-YB family protein