PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57850.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family MYB_related
Protein Properties Length: 89aa    MW: 10220.3 Da    PI: 8.4515
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.87e-101563348
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqkyl 48
                     +WT+   + + +a +++ ++   +W  +a+ +g g+t++++k ++q +l
       PON57850.1 15 SWTPKQNKSFERALALYDKDtpdRWQNVAKAVGSGKTAEEVKRHYQVLL 63
                     7*********************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MASSSLSKQS YNSSSWTPKQ NKSFERALAL YDKDTPDRWQ NVAKAVGSGK TAEEVKRHYQ  60
VLLEDLRQIE CGRVPIPEYK STNLDEEQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.14e-34MYB_related family protein