PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON57984.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 104aa    MW: 11553 Da    PI: 5.0487
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON57984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.82.3e-141397191
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
          B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91
                f+k +++s+v+   +l lp +f+++h   ++e+ t+   de+g  +  k+  +k++    l++GW++F  +++L +g  +vF+l++ +ef+
  PON57984.1 13 FVKPMLQSHVTGGLWLGLPVQFCKSHL--PHEDETINSIDENGDDFPTKYLADKTG----LSGGWRGFSIDHQLVDGGALVFHLVKPTEFK 97
                89************************4..335569***************666666....***********************99876663 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MLQSELEIDS SSFVKPMLQS HVTGGLWLGL PVQFCKSHLP HEDETINSID ENGDDFPTKY  60
LADKTGLSGG WRGFSIDHQL VDGGALVFHL VKPTEFKVFS TFKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.18e-43B3 family protein