PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58059.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 290aa MW: 32427 Da PI: 8.9389

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.3	8.4e-19	12	57	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l +v+++G+++W++I+r ++ gR++k+c++rw + PON58059.1 12 KGPWSPEEDESLQSLVQRYGPRNWSLISRSIP-GRSGKSCRLRWCNQ 57 79****************************.*********985 PP
2	Myb_DNA-binding	57.1	4.1e-18	66	108	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEd+++++a+ ++G++ W+tIar ++ gRt++ +k++w++ PON58059.1 66 PFSAEEDDIIIQAHSKYGNK-WATIARLLN-GRTDNAIKNHWNST 108 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MESSLRYADK VKGPWSPEED ESLQSLVQRY GPRNWSLISR SIPGRSGKSC RLRWCNQLSP 60 QVKHRPFSAE EDDIIIQAHS KYGNKWATIA RLLNGRTDNA IKNHWNSTLK RKCSSSEVED 120 GDGAGDEPSI RSRKRLASAP PPVTVSDLCY SSGSPSGSDA TDSQASRPVA RTGVVVDQSP 180 SRNDNLHSPN DNNEPSTRLT LSLPGTESFG YYSNQDSDNN NMPRREEVVV KRVSSQPEKM 240 TFGPDFMSVM QEMIRKEVRN YMADLERTCE FSRSDGVRNV GVKRIGITKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67300.1	4e-85	MYB family protein