PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON58130.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family bHLH
Protein Properties Length: 392aa    MW: 42864.4 Da    PI: 8.492
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON58130.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.59.9e-13320365655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++L +Av+YIk+Lq
  PON58130.1 320 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVDYIKDLQ 365
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MDSNTHQGFS HQNHQPNSGL LRFRSAPSSL FVNFTGSGDC GVNKNNSMEG SESERLFSRF  60
VDYTSGNNGS ESSPTFHDLD DKSAVMAAQQ RFSTGLPPHY PRQSSSTGGS GMDNGSFGLV  120
GSMAMDSQTQ AKSVNSSLVR QSSSPAGLFS HISVPNGYAA IKGAGNYGGL NGSHGEVSPS  180
TNRLKSQLSF SSRLPSLGVL SQISEVESES FEANTLDEEK LGNDNGVARF CGSGFTFGSW  240
NDSSNFSESF DGLRRDQDNN RKLCSSTQNA ELENRIHVLS HHLSLPKNST DVAMKKFPHF  300
QDSVPCKVRA KRGCATHPRS IAERVRRTRI SERMRKLQEL VPNMDKQTNT ADMLDLAVDY  360
IKDLQKQFKT LSDNRANCKC LNMQKPIPNQ VV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.19e-94bHLH family protein