PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON58174.1
Organism
Parasponia andersonii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia
Family GRAS
Protein Properties Length: 610aa    MW: 66848.2 Da    PI: 7.5004
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON58174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS343.63.3e-1052466102374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++ L+e+A a+s+g+ e+a+++L+rl   ++p+ ++ qR+  +++ AL++r++     + +  p+ e     s+e++a+++ ++++sP++ +++ +aN 
  PON58174.1 246 KQSLMEAASAISEGKPEAASEILTRLTLVSNPRPNSEQRVLEFIASALKSRVSP----VESPPPVMELF---SQEHTASTQSLYDLSPCFGLGFTAANL 337
                 578**************************************************9....44444444443...99999********************** PP

        GRAS 101 aIleavege.....ervHiiDfdisqGlQWpaLlqaLa.sRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                 aIlea+  +     ++vH+iDfdi++G+Q+++Ll++L+  R++g++ +l+iT+v++    + e+l+++g++L+++Ae+lg  fe +v  ++++++l+ +
  PON58174.1 338 AILEATLADqssskNKVHVIDFDIGHGGQYVNLLHQLTpLRQNGKAvTLKITTVAD----NCERLKSVGDKLSQLAERLGFGFELSV-RSQKISELSRD 431
                 ****98554456679***********************999977666*********....99************************9.9********** PP

        GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellg 291
                 +L ++p+E laVn++++l+r++desvs+e++rde+L+ vk l P+vv++veqe+++n+++F +r+ e++ yy al+ds+++++p+e+ +r+kvE + ++
  PON58174.1 432 SLGCEPDEPLAVNFAFKLYRMPDESVSTENPRDELLRRVKALAPRVVTLVEQELNTNTAPFTARVNETCAYYGALLDSVDSTVPKENPDRVKVEDA-VS 529
                 ************************************************************************************************.9* PP

        GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 r+ivn vaceg++r+er+e ++kWr+r+++aGF+p pls+++ + +++  r ++  g++v+ee+g +++gW++r+L+++SaWr
  PON58174.1 530 RKIVNSVACEGRDRFERCEVFGKWRARMGMAGFEPKPLSQNVRTRVRSGNRLHP--GFSVKEENGGICFGWMGRTLTVASAWR 610
                 ************************************************999999..**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 610 aa     Download sequence    
MQSGFTGAGG LPDLYTGGRS TMNNNPSQPS PFHRSQLPDL IFNSTMSRIA RQNPIPTTLI  60
GKRTLAEFQS HQQYQPNLDL AQASYLRSVK PRTYQQSSPI SPLSPMEFSP TMTTTWSESP  120
STTSSQRFGL PLLQHLRPQP VSAAVQGVPY VNNPVQNRVL AVDSDKKMMN HRLQELEKEL  180
LNDIDEGEGD AVSAITNNSN SEWSETIQNL ISPNQTQKPI SPSPTSSSSS SSSSSVASPA  240
SSTCSKQSLM EAASAISEGK PEAASEILTR LTLVSNPRPN SEQRVLEFIA SALKSRVSPV  300
ESPPPVMELF SQEHTASTQS LYDLSPCFGL GFTAANLAIL EATLADQSSS KNKVHVIDFD  360
IGHGGQYVNL LHQLTPLRQN GKAVTLKITT VADNCERLKS VGDKLSQLAE RLGFGFELSV  420
RSQKISELSR DSLGCEPDEP LAVNFAFKLY RMPDESVSTE NPRDELLRRV KALAPRVVTL  480
VEQELNTNTA PFTARVNETC AYYGALLDSV DSTVPKENPD RVKVEDAVSR KIVNSVACEG  540
RDRFERCEVF GKWRARMGMA GFEPKPLSQN VRTRVRSGNR LHPGFSVKEE NGGICFGWMG  600
RTLTVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-172GRAS family protein