PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58217.1

Organism

Parasponia andersonii

Taxonomic ID

3476

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Parasponia

Family

WRKY

Protein Properties

Length: 417aa MW: 45723.5 Da PI: 5.7732

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.7	1.5e-30	233	291	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+++++tY+geH+h+ PON58217.1 233 NDFWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPDTFVVTYTGEHTHP 291 79***********************998**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MAEDWDLYAV VRSCKSVTTT TSSSATTTAA AAATTDSMNS GKTTSLSEDS LSCLASLTFE 60 EENDPFFSFP NLGEPRTNAF QELQEFYKPF FSINPTPTTT IMGTSTQGII PNSSISRFGG 120 SSGQQHHVLQ YDVPQQQHHH LRPPPNDVVG SQFSPKPYVS GFGGLHKRHQ LHERDQDSQL 180 LLQRETSPRA TPTSPLPPLP LPTMPISQTP RSRKRKNQQK KMVCHVSAEN LSNDFWAWRK 240 YGQKPIKGSP YPRNYYRCSS SKGCAARKQV ERSNTDPDTF VVTYTGEHTH PRPTHRNSLA 300 GSTRSKLSPA TAAAAKRDSS DLTTPPPPQS ATGLSPTTPL TVAQTEEEAG AKKKQPEEKG 360 RGGEKGSEDI LMEDEMDLDE NEDEDDEDDV LISNMGLSDD FFLGLTELDC SPPGAAC

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MAEDWDLYAV VRSCKSVTTT TSSSATTTAA AAATTDSMNS GKTTSLSEDS LSCLASLTFE  60
EENDPFFSFP NLGEPRTNAF QELQEFYKPF FSINPTPTTT IMGTSTQGII PNSSISRFGG  120
SSGQQHHVLQ YDVPQQQHHH LRPPPNDVVG SQFSPKPYVS GFGGLHKRHQ LHERDQDSQL  180
LLQRETSPRA TPTSPLPPLP LPTMPISQTP RSRKRKNQQK KMVCHVSAEN LSNDFWAWRK  240
YGQKPIKGSP YPRNYYRCSS SKGCAARKQV ERSNTDPDTF VVTYTGEHTH PRPTHRNSLA  300
GSTRSKLSPA TAAAAKRDSS DLTTPPPPQS ATGLSPTTPL TVAQTEEEAG AKKKQPEEKG  360
RGGEKGSEDI LMEDEMDLDE NEDEDDEDDV LISNMGLSDD FFLGLTELDC SPPGAAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	9e-60	WRKY family protein