PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON58266.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NF-YC

Protein Properties

Length: 264aa MW: 29506.3 Da PI: 5.8696

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON58266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.8	4.9e-56	81	185	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflvdi+ PON58266.1 81 QLQMFWANQmqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDII 179 89****988889********************************************************************************* PP NF-YC 97 prdelk 102 prdelk PON58266.1 180 PRDELK 185 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MDQSEQTQQQ QTVVGIVAGS GQMSYGPPSY QTSPMVASGA PAVAVPSPTQ PPGTFSNSSH 60 QLAYQQAQHF HHQQQQQQQQ QLQMFWANQM QEIEQTTDFK NHSLPLARIK KIMKADEDVR 120 MISAEAPVIF AKACEMFILE LTLRSWIHTE ENKRRTLQKN DIAAAISRTD VFDFLVDIIP 180 RDELKEEGLG ITKGTLPVVG SPADIPYYYV PPQHPAGPTG MIMGKPVDQA AMYAAQQPRP 240 PMAFVPWPQT QPQQQQQQQP QTDT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	154	160	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	3e-83	NF-YC family protein